digest
|
This is the complete list of members for digest::Digester< P >, including all inherited members.
append_seq(const char *seq, size_t len) | digest::Digester< P > | inline |
append_seq(const std::string &seq) | digest::Digester< P > | inline |
Digester(const char *seq, size_t len, unsigned k, size_t start=0, MinimizedHashType minimized_h=MinimizedHashType::CANON) | digest::Digester< P > | inline |
Digester(const std::string &seq, unsigned k, size_t start=0, MinimizedHashType minimized_h=MinimizedHashType::CANON) | digest::Digester< P > | inline |
get_chash() | digest::Digester< P > | inline |
get_fhash() | digest::Digester< P > | inline |
get_is_valid_hash() | digest::Digester< P > | inline |
get_k() | digest::Digester< P > | inline |
get_len() | digest::Digester< P > | inline |
get_minimized_h() | digest::Digester< P > | inline |
get_pos() | digest::Digester< P > | inline |
get_rhash() | digest::Digester< P > | inline |
get_sequence() | digest::Digester< P > | inline |
new_seq(const char *seq, size_t len, size_t start) | digest::Digester< P > | inlinevirtual |
new_seq(const std::string &seq, size_t pos) | digest::Digester< P > | inlinevirtual |
roll_minimizer(unsigned amount, std::vector< uint32_t > &vec)=0 | digest::Digester< P > | pure virtual |
roll_minimizer(unsigned amount, std::vector< std::pair< uint32_t, uint32_t > > &vec)=0 | digest::Digester< P > | pure virtual |
roll_one() | digest::Digester< P > | inline |